On Systematic Nomenclature

OK, this may seem like a pretty serious geek-out, but a pet peeve of mine has just been tweaked by the New York Times.  Olivia Judson has written her usual stimulating and thought-provoking essay, this time on the recent decoding and publication of the Neanderthal genome by Svante Pääbo and colleagues at the Max Planck Institute for Evolutionary Anthropology in Leipzig.  As she notes, this is a remarkable accomplishment that raises so many questions -- in the best of senses.

My peeve is the use of the Latin binomial for our species in the caption of the figure comparing an anatomically modern human skeleton with a reconstruction of a Neanderthal skeleton. The caption reads:

A reproduction of a Neanderthal skeleton, left, and the original modern homo sapien skeleton, right.

Egads! First, our genus is, of course, Homo, not homo (note the capitalization and some sort of typographic elaboration, either italics or underline to denote the special status of a Latin binomial).  Second, the species name is sapiens not sapien.

Systematic nomenclature is abused all the time.  I shudder every time I read the ingredients list on the Aveda shampoo in our shower (ingredient #3 of the clove shampoo is written "Prunus Amydalus Dulcis (Sweet Almond)").  It's nice that they are trying to be specific and precise about the composition of their product, but get the naming conventions right!  Even if it's impractical to italicize the text for printing reasons, please remember, genera are capitalized; species (and sub-species) are lower case.

Why am I so uptight about such a seemingly trivial issue of typography and convention?  It's because nomenclature matters in science. In particular, I think that systematic nomenclature (i.e., nomenclature that describes evolutionary relationships) does for biology what Bertrand Russell argued good formal notation does for mathematics and logic: provides a subtlety and suggestiveness that allows it to almost teach for itself.

Nice Piece on Burning in the Stanford Report

As part of a series of articles on interdisciplinary environmental research at Stanford, the Stanford Report has just published a nice piece on the research on Aboriginal burning in Western Australia led by Rebecca and Doug Bird. This work is supported by a grant from the Woods Institute Environmental Venture Project fund as well as a major grant from the National Science Foundation.  We have a fairly recent paper in PNAS that describes some of the major findings, which I have written about previously here.

We've got some exciting things in the works as a follow-up to this paper thanks to the EVP funding. These include agent-based models of foraging and its effects on landscape development and new statistical methods for characterizing the scale and pattern of burning-induced landscape mosaics.  We're also hoping to move into some comparative work across foraging populations and to expand upon the ecological interactions between human foragers and plant species upon which they depend.